Twitter | Pretraživanje | |
Stephen Plaza
Technical lead and software/project manager of the Fly EM project () .
66
Tweetovi
129
Pratim
284
Osobe koje vas prate
Tweetovi
Stephen Plaza 29. sij
Odgovor korisniku/ci @stephenplaza
For part of Jan 22nd, there was an error in the exported adjacency files (CSVs), which could affect some analyses. Please re-download at
Reply Retweet Označi sa "sviđa mi se"
Stephen Plaza 29. sij
Odgovor korisniku/ci @stephenplaza
We will hopefully re-export a minor revision soon to fix a few of the more database-related issues ("v1.0.1"). The next larger revision, "v1.1", which will reflect some improvements to the underlying reconstruction, is not for a few months.
Reply Retweet Označi sa "sviđa mi se"
Stephen Plaza 29. sij
We are maintaining a list of known issues that are mostly straightforward to address: A couple technical details in the following thread...
Reply Retweet Označi sa "sviđa mi se"
Stephen Plaza proslijedio/la je tweet
Eric Topol 23. sij
It took both remarkable human and artificial intelligence to construct the most detailed map of a to date a herculean effort!
Reply Retweet Označi sa "sviđa mi se"
Stephen Plaza 22. sij
next steps: and various collaborating labs will submit several papers in the next several weeks. Reconstruction revisions (hopefully minor) to v1.0 by around April. Currently ramping up to reconstruct the CNS...
Reply Retweet Označi sa "sviđa mi se"
Stephen Plaza 22. sij
In an avalanche of tweets, I forget to shout-out the integral work of the Hess lab: Shan Xu and truly ground-breaking fib-sem data
Reply Retweet Označi sa "sviđa mi se"
Stephen Plaza proslijedio/la je tweet
Viren Jain 22. sij
I recommend checking out the "mushroom body" interactive link! Grateful for this collaboration with and hope the resource proves useful for the community.
Reply Retweet Označi sa "sviđa mi se"
Stephen Plaza 22. sij
Odgovor korisniku/ci @stephenplaza
Here is a link for all data we inject into neuPrint in CSV format. If you want everything that goes into neuPrint (sans the 3d data and skeletons), download from here:
Reply Retweet Označi sa "sviđa mi se"
Stephen Plaza proslijedio/la je tweet
STAT 22. sij
The feat by researchers at and Howard Hughes Medical Institute amounts to a big “told you so” to skeptics who said it couldn’t be done this soon, this inexpensively, or this well.
Reply Retweet Označi sa "sviđa mi se"
Stephen Plaza 22. sij
Odgovor korisniku/ci @stephenplaza
For people that are interesting in bulk downloading data ... it is best not to do this through the interactive UI in neuPrint. Please consult for more details. We will also provide a big directory of all the skeleton morphologies soon as well.
Reply Retweet Označi sa "sviđa mi se"
Stephen Plaza 22. sij
Odgovor korisniku/ci @CinchronITN
Probably APL because every time I see it I think it has to be a mistake ... it's massive and looks like several neurons fused together!
Reply Retweet Označi sa "sviđa mi se"
Stephen Plaza 22. sij
Odgovor korisniku/ci @stephenplaza
A better link for viewing neuroglancer:
Reply Retweet Označi sa "sviđa mi se"
Stephen Plaza 22. sij
Odgovor korisniku/ci @csdashm
About 1 hour of asking a few biologists what neurons looked cool ... not exactly an in-depth study
Reply Retweet Označi sa "sviđa mi se"
Stephen Plaza proslijedio/la je tweet
Stephen Plaza 22. sij
Proud to introduce "hemibrain" : a connectome of the Drosophila central brain. . Please see overview website: Play with data on neuPrint:
Reply Retweet Označi sa "sviđa mi se"
Stephen Plaza 22. sij
Odgovor korisniku/ci @stephenplaza
We tried to make the best dataset possible but this is "v1.0". We will have a new revision in a few months. Feel free to make comments and add annotations to the dataset using neuroglancer.
Reply Retweet Označi sa "sviđa mi se"
Stephen Plaza 22. sij
Odgovor korisniku/ci @stephenplaza
But let's say you don't care about flies and just like big graphs. Here is a compact 26TB->25MB data model reduction containing the adjacency matrix. We annotate brain region information for each connection to make the model richer.
Reply Retweet Označi sa "sviđa mi se"
Stephen Plaza 22. sij
Odgovor korisniku/ci @stephenplaza
We are hoping that non-fly people will fall in love with flies! Here are some of our favorite neurons!
Reply Retweet Označi sa "sviđa mi se"
Stephen Plaza 22. sij
Odgovor korisniku/ci @stephenplaza
neuroglancer is a great way to browse the data. Jeremy made a lot of nice additions recently:
Reply Retweet Označi sa "sviđa mi se"
Stephen Plaza 22. sij
Odgovor korisniku/ci @stephenplaza
For new neuPrint users ... you will need to login with any google email credential. Tutorials and instructions in the 'i' section. Tutorial here: Other questions or issues today:
Reply Retweet Označi sa "sviđa mi se"
Stephen Plaza 22. sij
Odgovor korisniku/ci @garybhuang @wtkatz i 3 ostali
Many thanks to large proofreader effort led by Pat Rivlin and Ruchi Parekh. Incredible software and algorithm group , Stuart Berg, , Lowell Umayam, , Tom Dolafi, Don Olbris, , Rob Svirskas ... and many others!
Reply Retweet Označi sa "sviđa mi se"