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Andrew Erskine
@
incisrdrew
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Neuro postdoc @ USC. Neurophysiology of sensation and behaviour.
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Pratim
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Osobe koje vas prate
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Andrew Erskine
@incisrdrew
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27. pro |
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Andrew Erskine
@incisrdrew
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26. pro |
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Merry xmas pic.twitter.com/ma3WdqS8Vf
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Andrew Erskine
@incisrdrew
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14. stu |
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I think it would depend on what you need to track on the whiskers. I'm sure it would have no problem tracking whisker base, angle etc. Whisker tip contacts with the texture might be more tricky!
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Andrew Erskine
@incisrdrew
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7. lis |
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Calling time on my first #gamejam #LudumDare45. Introducing medium-sized field simulator 2019, made from scratch in <72 hours.
ldjam.com/events/ludum-d… pic.twitter.com/SUJujsKuSC
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Andrew Hires
@AndrewHires
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29. kol |
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Our deep-dive into mouse behavior, to address how mice locate objects with their whiskers was published OA today in @CurrentBiology.
If you are interested in learning more, please see this Tweetorial by the first author, Jon Cheung.
cell.com/current-biolog… twitter.com/JonCheung6/sta…
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БEЛDΛМ
@beldamRecords
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15. lip |
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bxv_neurosci
@bxv_neurosci
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9. ožu |
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CHIME: CMOS-hosted in-vivo microelectrodes for massively scalable neuronal recordings dlvr.it/R0Tqpl
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Andrew Erskine
@incisrdrew
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7. ožu |
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Andrew Erskine
@incisrdrew
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29. stu 2018. |
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Not extensively but it does still work. Analyzing frames can be slow on local CUP but see: twitter.com/mwmathislab/st…
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Andrew Erskine
@incisrdrew
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28. stu 2018. |
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Yes, 2 rows of 3 whiskers left intact here. Frame rate ~300hz here to get an imaging region that spans all whiskers in 2 planes.
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Mackenzie Mathis
@TrackingActions
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24. stu 2018. |
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And, lastly... my favorite part: we demo how to use #deeplabcut to train a single camera-invariant network on a very challenging problem-> a cheetah in high-speed pursuit: pic.twitter.com/RMgXjflYai
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Romeo RACZ
@romeoracz
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5. stu 2018. |
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jULIEs: custom neural probes for recording and stimulation at poster LLL48. Get in touch to see how we're supercharging research and get yours today @MCIneuro #neuroscience #neuroengineering #stimulation #neuromodulation #research #neurotech #Neurosci2018 @SfNtweets @elonmusk pic.twitter.com/9Dmn8wxnuF
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Andrew Erskine
@incisrdrew
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4. lis 2018. |
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This was with the original DeepLabCut code? I had similar errors running on the cloud / virtualenv for the first time. Adaptations in the dlc-cloudml repo should account for some of them with more explicit import statements
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Andrew Erskine
@incisrdrew
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4. lis 2018. |
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Haven't tried yet, training finishes relatively quickly for me but would still be great to see if it can be sped up. Not sure but perhaps just a case of changing the scale tier in the config file?
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Andrew Erskine
@incisrdrew
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2. lis 2018. |
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I used Google's cloud ML engine for the model training step, which required some adaptation of the original code. Maybe useful for those without access to local GPUs for continuous training: github.com/RoboDoig/dlc-c…
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Andrew Erskine
@incisrdrew
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2. lis 2018. |
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Blown away by how well #DeepLabCut works. Completely random frame selection + overnight model training resulted in a tracker capable of following multiple whiskers simultaneously across different imaging planes, even during overlap. pic.twitter.com/ar9sSwPz4v
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Andrew Erskine
@incisrdrew
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24. lip 2018. |
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This I think is a kettle for boiling nightmares pic.twitter.com/Td0p4rPAoq
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Andrew Erskine
@incisrdrew
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24. lip 2018. |
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Had a great time at @LACMA today. Check out this pair of rascals. pic.twitter.com/Pgn8dGatlq
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The Crick
@TheCrick
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31. svi 2018. |
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New #crickpaper reveals that brain activity in mice during smell-learning tasks changes rapidly, improving odour discrimination and detection due to changes in sniffing. Read the @NeuroCellPress paper from @AndreasTschafer’s lab: cell.com/neuron/fulltex… pic.twitter.com/1OchFWpgQy
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Mackenzie Mathis
@TrackingActions
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10. tra 2018. |
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Automated markerless tracking of user-defined body parts using deep learning! Part of our quest to quantify behavior to better understand the brain. Was a true pleasure to work on this with @trackingplumes and @matthiasbethge! Our preprint: arxiv.org/abs/1804.03142… #DeepLabCut pic.twitter.com/g8McMgIC7q
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