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Pradeepa Madapura
@PradeepMadapura
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20. ožu 2018. |
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Great news for people planning #ChIPseq nature.com/articles/nmeth…
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Altuna Akalin
@AltunaAkalin
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24. ruj |
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updated book draft "computational #genomics with R" #Rstats compgenomr.github.io/book/. New #Chipseq chapter added, in addition to the latest #Machine
, #multiomics and #rnaseq chapters. There are most likely typos & mistakes, you can help us improve it compgenomr.github.io/book/how-to-co… pic.twitter.com/aGBxh5pBz4
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Oriol Fornés
@ofornes
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15. stu |
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Hi tweet peers, I have a (maybe obvious) question regarding peak summits: for which types of #genomics data do you think they are relevant and why? (e.g. in #chipseq one expects the TF to bind near the peak max) #generegulation @amathelier @anshulkundaje @generegulation
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Pradeepa Madapura
@PradeepMadapura
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13. stu 2017. |
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Convergent origination of a Drosophila-like dosage compensation mechanism in a reptile lineage genome.cshlp.org/cgi/content/lo…
(Proud about this awesome collaborative #Chipseq work with Henrik Kaessmann lab) pic.twitter.com/weypnVXgoE
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James Marsh
@tothejim
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1. velj 2018. |
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A new #R package for predicting #chromatin looping interactions from #chipseq experiments bit.ly/2nzgJft pic.twitter.com/JOMd9gHcmq
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Chromatin Haiku
@ChromatinHaiku
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21. pro 2017. |
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Poor sonication
Of heterochromatin:
Yields gradient-seq
#ChromatinHaiku #H3K9me3 #ChIPseq #MassSpec
cell.com/molecular-cell… pic.twitter.com/T9leukVEpW
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Altuna Akalin
@AltunaAkalin
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23. svi |
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HOT or not: examining the basis of high-occupancy target regions. We recommend caution when interpreting the #ChIPseq peaks over HOT regions. Published at @NAR_Open academic.oup.com/nar/advance-ar… congrats to @katwre @vedranfranke @borauyar @TursunLab #genomics pic.twitter.com/F1q1NAc4IP
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Vivek Bhardwaj
@vivekbhr
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4. ruj 2018. |
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Have tons of #ChIPseq / #RNAseq / #HiC / #ATACseq / #Bisulfite / #scRNAseq datasets to analyze? ✅ Looking for workflows that are easy to install and use? ✅ Also want flexibility in processing of data? ✅ Have a look at our latest preprint..!! 👇👇 #genomics #bioinformatics twitter.com/biorxiv_genomi…
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Tobias Straub
@musikutiv
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7. stu |
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1/ another ChIPseq - Thread
#bioinformatics #epigenetics #chipseq
Recent paper in @nature rdcu.be/bWnc2 by @PhilippMews @berger_lab on histone acetylation in the brain upon ethanol exposure.
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Nicolas Descostes
@NDescostes
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2. lis |
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It took me around 4 hours to prepare a 2 days workshop on processing #chipseq data with #usegalaxy thanks to their amazing tutorials. I just combined the official content and tested it... and people were happy about it!
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Stephen Rudd
@SAGRudd
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10. ožu 2014. |
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PolyaPeak: Detecting Transcription Factor Binding Sites from #ChIPseq Using Peak Shape Information buff.ly/1nxJ1Qo
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Luis María Vaschetto
@vaschetto_luis
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29. ruj |
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Genome-Wide Profiling of Histone Modifications with ChIP-Seq #epigenomics #Chipseq #chromatin #cereal_genomics @activemotif @ChIP_seq @BeGenomics @evolutionraad @ChromatinHaiku @EpiCSA0 @_atanas_ @generegulation @SciBlogHub @loops_enhancers
link.springer.com/protocol/10.10…
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Matt.0
@MattOldach
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18. lip 2017. |
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I just bought The Biostar Handbook because @tangming2005 wrote a #chipseq analysis chapter (Thanks @jermdemo @wouter_decoster and others!)
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Mark Gerstein
@MarkGerstein
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29. stu 2015. |
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#Enhancer Evolution across 20 Mammal[s is faster than for promoters] by @PaulFlicek lab cell.com/cell/abstract/… H3K27ac & H3K4me3 #chipseq
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Barkai Lab
@BarkaiLab
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29. stu 2017. |
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Karin from @BarkaiLab wrote a song about #ChIPseq (to the tune of Lemon Tree)... enjoy! Karin is working with @voichek on expression homeostasis during #DNA #replication🔬 pic.twitter.com/3g1foTTEhK
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Daniel Vera
@_Daniel_Vera
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5. kol 2018. |
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The Sinclair Lab at Harvard is seeking a #postdoc with #bioinformatics expertise for projects utilizing #genomics and #proteomics to study the biology of #aging and age-associated diseases. DM for info. #singleCell #RNAseq #HiC #ChIPseq #ATACseq linkedin.com/jobs/view/7905…
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Chromatin Haiku
@ChromatinHaiku
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16. ožu 2017. |
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Antibody choice:
Poly or mono clonal?
Tested for ChIP-seq
#ChromatinHaiku #chipseq
rdcu.be/mmbh pic.twitter.com/nxqgktE4mj
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SIB
@ISBSIB
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5. ožu 2018. |
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We are pleased to announce the following SIB course: #ChipSeq data analysis | from quality check to motif discovery and more | Introduction to the Eukaryotic Promoter Database @EPD_SIB | Lausanne, 9-13 April 2018 | More info: goo.gl/sqrGdd @unil pic.twitter.com/mahyqpIRKG
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Rafael Viana
@RafaelVianaphD
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18. stu |
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Our latest study in #neuron identity is available biorxiv.org/content/10.110…
Combining #ATACseq and #ChIPseq to discrimitate cellular signals
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V E N U 👨🏽💻
@itsvenu_
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30. stu 2017. |
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ggplot2: A function for aesthetic 'super-enhancer' plots venuthatikonda.github.io/genomics/super… #ggplot2 #SuperEnhancer #R #rstats #chipseq #genomics #pubqualityplot
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