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Fiona Nielsen
@glyn_dk
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Jul 7 |
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"people still believe in the impact factor as a measure of recognition" #incentives #RDM
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Fiona Nielsen
@glyn_dk
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Jul 7 |
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Real life examples: "sample naming in paper does not match sample names submitted to repository!" #data #sharing #challenges
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Fiona Nielsen
@glyn_dk
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Jul 7 |
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"Sometimes journals ask if data has been deposited, but they never ever ask if the data is in a good shape!" #dataquality #RDM
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Fiona Nielsen
@glyn_dk
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Jul 7 |
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Fiona Nielsen
@glyn_dk
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Jul 7 |
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If you get money from @wellcometrust must publish in open access journals and make data available - @ymatang
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Fiona Nielsen
@glyn_dk
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Jul 7 |
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Researchers: look after (meta) data properly - adopt standards, cross-check annotations in the lab #RDM #metadata #archiving @DNADigest
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Fiona Nielsen
@glyn_dk
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Jul 7 |
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Advice from @ymatang: submit data even before paper publication process - don't wait till last minute! @ArrayExpressEBI
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Fiona Nielsen
@glyn_dk
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Jul 7 |
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Fiona Nielsen
@glyn_dk
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Jul 7 |
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Most researchers want to do the right thing - as long as you guide them and show them how - says @ymatang
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Fiona Nielsen
@glyn_dk
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Jul 7 |
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An extra carrot: submit your data nicely using #annotare and it will be pushed to and analysed in Expression Atlas @ArrayExpressEBI
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DNAdigest.org
@DNADigest
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Jul 7 |
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Thanks to our sponsor @repositiveio for supporting our meet-up events this year!
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Amy Tang
@ymatang
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Jul 9 |
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That's why w/ #AnnotareEBI #microarray & #sequencing data submission tool for @ArrayExpressEBI, we don't compromise quality over ease of use
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Amy Tang
@ymatang
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Jul 9 |
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Our team's served many submitters dumping data @ArrayExpressEBI AFTER their papers were accepted. Not good news for #ReproducibleResearch. pic.twitter.com/6qMygnzHfI
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Amy Tang
@ymatang
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Jul 9 |
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We also tried refusing to load some v. bad submissions (e.g. bare min sample info, no usable data files), but the papers still get published
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Varsha Khodiyar
@varsha_khodiyar
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Jul 9 |
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I would expect repositories to refuse to upload bad data! In near future papers w/o data will not be trusted; eventually won't be published.
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Varsha Khodiyar
@varsha_khodiyar
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Jul 9 |
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We (research community) need repositories, esp data specific repositories, to maintain high standards
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