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Melanie Stefan
Computational Neurobiochemist She/her. Profile pic by the amazing
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Melanie Stefan 2h
Replying to @rundel @zje_institute
This is all sooo cool, can’t wait to try it out on Biomedical Informatics courses at
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Melanie Stefan 2h
Replying to @rundel
CR: Not on CRAN yet, but soon (tm)
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Melanie Stefan 2h
Replying to @rundel
CR: Collect repo statistics (e.g. number of changes, time of last change, repo contributors, ...)
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Melanie Stefan 2h
Replying to @rundel
CR: Use GitHub education discount to access full functionality
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Melanie Stefan 2h
Replying to @rundel
CR: Can use GitHub actions to create checks and badges giving students instant feedback
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Melanie Stefan 2h
Replying to @rundel
CR: Automated feedback on formatting
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Melanie Stefan 2h
Replying to @rundel
CR: To grade, just clone assignment repos
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Melanie Stefan 2h
Replying to @rundel
CR: For Team assignments, can put everybody’s email in the team repo Readme
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Melanie Stefan 2h
Replying to @rundel
CR: If Original assignment has error, corrections can be posted at once to all assignment repos
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Melanie Stefan 2h
Replying to @rundel
CR: Creating an assignment: Specify Info such as teams and source repo. Assumes privacy by default. Students turn in assignment by pushing
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Melanie Stefan 2h
Replying to @rundel
CR: Set up student roster; invite students into the organisation; can see what invites are pending to send reminders
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Melanie Stefan 2h
Replying to @rundel
CR: Course Management through GitHub using ghclass:
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Melanie Stefan 2h
Replying to @rundel
CR: Course with 200 students, several assignments, students turn in .Rmd file
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Melanie Stefan 2h
Replying to @rundel
CR: Teaching statistical computing: research skills, reproducible computing, R, version control
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Melanie Stefan 2h
Next at the meeting Colin Rundel is talking about using for teaching
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Melanie Stefan 2h
Replying to @edinb_r @Gwmngilfen
GS: Feedback on deployr very welcome
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Melanie Stefan 2h
Replying to @edinb_r @Gwmngilfen
GS: Wrote deployr App: deploy a Directory from RStudio with the click of a button
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Melanie Stefan 2h
Replying to @edinb_r @Gwmngilfen
GS: Package Management for R is a whole other topic, won’t talk about this today
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Melanie Stefan 3h
Replying to @edinb_r @Gwmngilfen
GS: All certificates in place, now Redirect http to https
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Melanie Stefan 3h
Replying to @edinb_r @Gwmngilfen
GS: Get certificates from letsencrypt
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